I have been rather quiet here, my personal blog for a variety of reasons, mainly because past collaborations encroaching into the spare after-hours I would otherwise dedicate to it (i.e. weekend early mornings). I have been involved in various projects, many of which I would like to write blog post about or people would like me to write about, so I am well behind on what I would like to post. However, as part of OPIG, I have written a few posts there (Blopig), some on requests (who would willingly write about fixing CUDA installations or exposing Jupyter notebooks in a compute node via reverse port forwarding?) and some out of personal choice.
A segfault and NaN driven series of disconnected ideas, analyses and just plain silly posts about computational biochemistry, synthetic biology and microbiology.
Sunday 10 March 2024
Monday 22 January 2024
Custom carbon colours in py3Dmol
Due to NGLView (the Python module) having a frozen older IPywidget version it breaks Colab and the major change for the latter library was a year ago (early 2023), so I am forced to revisit old code and switch to py3Dmol in my Colab demos. Today I figured out how to use custom carbon colours.
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